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List of Projects

TSUBAME Encouragement Program for Young User and Female User FY2017, FY2016
TSUBAME Encouragement Program for Younger User

TSUBAME Encouragement Program for Young User and Female User

FY2017

  • Yuko OTANI (Univ. of Tokyo)
    Dynamic control of peptide conformation by using synthetic bridged proline analogs
  • Hiroshi Watanabe (Univ. of Tokyo)
    Development and application of molecular dynamics simulation for hydrogen ion in solution
  • Misa SAYAMA (Univ. of Tokyo)
    Theoretical Analysis of Lipid Binding Pathway to Membrane Receptor Proteins
  • Yohei Miki (Univ. of Tsukuba)
    Hunting wandering intermediate mass black holes in galactic halo
  • Ryuhei Harada (Univ. of Tsukuba)
    Developments of Transition Path Sampling Methods based on Parallel Cascade Selection Molecular Dynamics Simulation
  • Hiroki Otaki (Nagasaki Univ.)
    Molecular dynamics study of aggregation behavior of amyloid fibrils
  • Xiao Ma (Univ. of Tsukuba)
    Molecular dynamics simulation for the elucidation of the molecular diffusion behavior in the CO2 hydrate
  • Azusa MURAOKA (Japan Women's Univ.)
    Solvent effects on the helical inversion reaction pathway of the helical molecules

FY2016

  • Yu YAMAMORI (Osaka Univ.)
    Application of Sparse Structure Learning to Analysis of Molecular Simulation
  • Yuko OTANI (Univ. of Tokyo)
    Generation of protein structure motif based on amino acid sequence involving synthetic bridged proline derivatives
  • Shinji IIDA (Osaka Univ.)
    Functional Analyses of an Intrinsically Disordered Protein by using an Original Extended Ensemble Molecular Dynamics Approach
  • Misa SAYAMA (Univ. of Tokyo)
    Theoretical Analysis of Interactions of Ligands with Membrane Receptor Proteins
  • Kouki KAWAMURA (NMRI)
    Large-Scale Particle Method for Simulation of Ship Behaviour and Safe Ship Design on TSUBAME 2.5
  • Masatoshi TAKAYANAGI (Univ. of Yamanashi)
    An implementation of the communication avoiding QR on GPU clusters
  • Kenji KAWAI (Tokyo Tech & Univ. of Tokyo)
    Numerical research of elastic wave propagation in the porous rock
  • Xiao Ma (Univ. of Tsukuba)
    Molecular dynamics simulation for the elucidation of the molecular diffusion behavior at the growth phase of the CO2 hydrat
  • Azusa MURAOKA (Japan Women's Univ.)
    Theoretical study on the inversion reaction process of high-order helical molecules
  • Chie MOTONO (AIST)
    Protein-ligand binding prediction using Supervised MD simulation

TSUBAME Encouragement Program for Younger User

Apr FY2017

  • Yohei Cho (Tokyo Tech)
    Title of Project: Improvement of Aerodynamic Property of Human Powered Aircraft by Analyzing Surrounding Fluid Flow (Continuous research)

Jan FY2016

  • Hanaya OKUDA (Univ. of Tokyo)
    Title of Project: Calculations of frictions on (001) plane of brucite (Continuous research)
  • Yohei Cho (Tokyo Tech)
    Title of Project: Improvement of Aerodynamic Property of Human Powered Aircraft by Analyzing Surrounding Fluid Flow
  • Rina YAMAYA (Univ. of Tokyo)
    Title of Project: Waveform inversion for source parameters of deep earthquakes and earth structure (Continuous research)

Oct FY2016

  • Hanaya OKUDA (Univ. of Tokyo)
    Title of Project: Calculations of frictions on (001) plane of brucite

Jul FY2016

  • Rina YAMAYA (Univ. of Tokyo)
    Title of Project: Waveform inversion for source parameters of deep earthquakes and earth structure

Apr FY2016

  • Takeya INOUE (Tokyo Tech)
    Title of Project: Fluid Flow Analysis of a Human Powered Aircraft to improve Design accuracy (Continuous research)

Jan FY2015

  • Takeya INOUE (Tokyo Tech)
    Title of Project: Fluid Flow Analysis of a Human Powered Aircraft to improve Design accuracy
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